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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1442
candidate regulatory elements
1168
target gene predictions
951
histone modifications
807
accessible chromatin
776
binding sites
100
variant allelic effects
38
chromatin state
10
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2216
February, 2021
1425
September, 2022
322
November, 2021
277
May, 2021
258
June, 2020
229
February, 2024
109
May, 2020
94
October, 2022
56
January, 2021
43
January, 2020
41
March, 2020
41
November, 2022
36
August, 2021
36
May, 2024
32
August, 2017
27
February, 2023
16
April, 2020
15
May, 2022
10
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5312
bed bed3+
734
bed bed9
595
tsv
478
bigWig
34
bed bed9+
30
bigBed bed9
24
csv
19
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5266
Homo sapiens
Biosample type
1975
cell line
1550
tissue
1460
primary cell
322
in vitro differentiated cells
3
stem cell
Organ
557
epithelium
338
connective tissue
309
brain
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
embryo
175
heart
175
limb
vasculature
165
skin of body
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
103
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
4913
AMP
322
ENCODE
60
T1D
16
LungMap
1
ITG
Genome assembly (visualization)
5307
hg19
721
GRCh38
1
hg18
organ_slims!
embryo
kidney
vasculature
BIOSAMPLE
TYPE
5312 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
breast cancer cell
11
9
+ See 728 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 189 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
1
15
2
2
2
1
+ See 287 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 95 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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