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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1653
candidate regulatory elements
1316
target gene predictions
959
histone modifications
874
accessible chromatin
801
binding sites
121
variant allelic effects
38
chromatin state
12
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2368
February, 2021
1610
September, 2022
326
November, 2021
281
May, 2021
280
June, 2020
277
February, 2024
133
May, 2020
99
October, 2022
64
January, 2020
56
January, 2021
48
August, 2021
41
March, 2020
41
November, 2022
37
May, 2024
32
August, 2017
31
February, 2023
19
April, 2020
13
May, 2022
12
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
2
November, 2020
2
September, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5796
bed bed3+
871
tsv
837
bed bed9
521
bigWig
108
txt
39
bigBed bed9
34
bed bed9+
21
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5750
Homo sapiens
Biosample type
2098
cell line
1763
tissue
1585
primary cell
344
in vitro differentiated cells
4
stem cell
Organ
557
epithelium
338
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
heart
175
limb
166
vasculature
165
skin of body
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
urinary bladder
6
vagina
5
trachea
3
nose
Project
5390
AMP
326
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5789
hg19
803
GRCh38
organ_slims!
liver
placenta
urinary bladder
BIOSAMPLE
TYPE
5796 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 755 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 212 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
endothelial cell
3
7
1
15
2
2
2
1
+ See 324 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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