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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1615
candidate regulatory elements
1297
target gene predictions
969
histone modifications
835
accessible chromatin
808
binding sites
113
variant allelic effects
36
chromatin state
13
caQTL
9
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
Date released
2363
February, 2021
1619
September, 2022
315
November, 2021
280
June, 2020
273
February, 2024
269
May, 2021
129
May, 2020
100
October, 2022
63
January, 2020
51
August, 2021
41
November, 2022
40
March, 2020
36
January, 2021
31
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
10
November, 2019
5
January, 2022
5
September, 2023
3
October, 2019
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
Available data
5706
bed bed3+
842
bed bed9
821
tsv
488
bigWig
108
txt
38
bigBed bed9
34
bed bed9+
21
csv
2
bigBed narrowPeak
1
bam
Organism
5660
Homo sapiens
Biosample type
2096
cell line
1735
tissue
1522
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
spleen
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5331
AMP
315
ENCODE
40
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5698
hg19
759
GRCh38
1
hg18
organ_slims!
mouth
pancreas
spleen
testis
BIOSAMPLE
TYPE
5706 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 753 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 203 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 317 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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