Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 39candidate regulatory elements
  • 38target gene predictions
  • 26accessible chromatin
  • 16binding sites
  • 7variant allelic effects
  • 6histone modifications
  • 3caQTL
  • 3eQTL
  • 1chromatin state
Date released
  • 41September, 2022
  • 34February, 2021
  • 13July, 2026
  • 10February, 2024
  • 8May, 2020
  • 5January, 2020
  • 4February, 2023
  • 4June, 2020
  • 3January, 2022
  • 3March, 2020
  • 3May, 2021
  • 3November, 2019
  • 3November, 2021
  • 2April, 2020
  • 2October, 2022
  • 1August, 2017
Available data
  • 2681tsv
  • 139bed bed3+
  • 27bed bed9
  • 23bigWig
  • 8bigBed bed9
  • 2txt
Organism
  • 139Homo sapiens
Collection Tags
  • 38EpiMap
  • 24ENCODE
  • 23DGA
  • 17ChIP-Atlas
  • 13ENCODE-rE2G
  • 6AMP
  • 4CMDGA
  • 3T1D
  • 3T2D
  • 3T2DKP
  • 3eQTLCatalogue
Biosample type
  • 72primary cell
  • 61tissue
  • 5cell line
  • 1in vitro differentiated cells
Organ
  • 744brain
  • 706blood
  • 548epithelium
  • 398kidney
  • 369lung
  • 344connective tissue
  • 300intestine
  • 295heart
  • 284musculature of body
  • 260skin of body
  • 192bodily fluid
  • 191large intestine
  • 189pancreas
  • 178embryo
  • 177limb
  • 166vasculature
  • 161liver
  • 151eye
  • 141extraembryonic component
  • 139blood vessel
  • 115stomach
  • 111muscle organ
  • 90mammary gland
  • 87adrenal gland
  • 87uterus
  • 85bone element
  • 82thymus
  • 81placenta
  • 78small intestine
  • 73prostate gland
  • 60ureter
  • 59adipose tissue
  • 56spleen
  • 54artery
  • 54gonad
  • 54lymph node
  • 54penis
  • 42thyroid gland
  • 39esophagus
  • 36spinal cord
  • 27ovary
  • 26testis
  • 19skeleton
  • 18lymphoid tissue
  • 18vein
  • 16mouth
  • 15nerve
  • 14bronchus
  • 14lymphatic vessel
  • 12breast
  • 12pituitary gland
  • 11bone marrow
  • 10urinary bladder
  • 9tongue
  • 9vagina
  • 5trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
Project
  • 134AMP
  • 3ENCODE
  • 2LungMap
Genome assembly (visualization)
  • 120hg19
  • 44GRCh38
BIOSAMPLE
TYPE

139 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
variant allelic effects
histone modifications
caQTL
eQTL
chromatin state
primary cell
endothelial cell of umbilical vein64221
endothelial cell of hepatic sinusoid66
dermis blood vessel endothelial cell62
fibroblast of pulmonary artery21121
pulmonary artery endothelial cell21111
tissue
coronary artery353211
tibial artery35321
aorta46
ascending aorta4411
thoracic aorta4311
cell line
smooth muscle cell of the coronary artery111
vein endothelial cell11
in vitro differentiated cells
endothelial cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego