Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
135
candidate regulatory elements
135
target gene predictions
100
accessible chromatin
77
binding sites
50
histone modifications
15
variant allelic effects
9
chromatin state
3
eQTL
2
caQTL
2
pQTL
Date released
160
February, 2021
130
September, 2022
50
November, 2021
42
February, 2024
32
June, 2020
31
October, 2022
17
May, 2021
9
August, 2017
9
January, 2020
9
May, 2020
8
May, 2024
7
November, 2022
3
April, 2020
3
August, 2021
3
March, 2020
3
May, 2022
2
January, 2021
2
November, 2020
2
September, 2018
2
September, 2023
1
February, 2023
1
June, 2021
1
October, 2019
Available data
528
bed bed3+
66
bed bed9
66
tsv
55
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
528
Homo sapiens
Biosample type
225
primary cell
208
cell line
50
tissue
44
in vitro differentiated cells
1
stem cell
Organ
557
epithelium
338
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
intestine
190
bodily fluid
181
blood
178
embryo
175
heart
175
limb
166
vasculature
165
skin of body
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
103
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
472
AMP
50
ENCODE
3
LungMap
2
T1D
1
ITG
Genome assembly (visualization)
527
hg19
103
GRCh38
organ_slims!
intestine
BIOSAMPLE
TYPE
528 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
variant allelic effects
chromatin state
eQTL
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
6
pericyte cell
3
10
10
foreskin fibroblast
6
2
1
4
2
osteoblast
2
2
5
3
2
fibroblast of lung
6
4
2
1
+ See 34 more…
cell line
K562
7
23
1
2
1
1
GM12878
2
8
1
2
1
1
GM06990
2
1
1
2
1
GM19240
1
2
1
2
1
HAP-1
2
2
1
1
1
+ See 38 more…
tissue
adipose tissue
7
8
2
1
1
1
omental fat pad
5
2
2
subcutaneous adipose tissue
2
2
1
1
1
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
1
+ See 5 more…
in vitro differentiated cells
adipocyte
4
6
4
1
1
4
mesenchymal stem cell
3
3
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download