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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
DNase-seq
4
Hi-C
Assay category
41
DNA accessibility
4
3D chromatin structure
Date released
35
June, 2019
4
July, 2019
4
October, 2019
2
November, 2018
Available data
420
bam
368
bigWig
330
bed narrowPeak
204
bigBed narrowPeak
124
tagAlign
94
tsv
58
bed broadPeak
49
bigBed broadPeak
45
bed bed3+
21
fastq
4
hdf5
3
bed bedMethyl
3
bigBed bedMethyl
3
hic
2
bedpe bed3+
1
bed bed3
1
tagAlign bed3+
1
tar
Organism
45
Homo sapiens
Biosample type
32
tissue
13
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
nerve
2
vein
1
spleen
Project
45
AMP
Genome assembly (visualization)
41
GRCh38
34
hg19
Lab
45
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
nerve
BIOSAMPLE
ASSAY
45 results
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DNase-seq
Hi-C
tissue
brain
14
coronary artery
2
frontal cortex
2
tibial artery
2
Ammon's horn
1
+ See 11 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
endothelial cell of umbilical vein
2
astrocyte of the hippocampus
1
+ See 4 more…
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