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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 32DNase-seq
  • 3Hi-C
Assay category
  • 32DNA accessibility
  • 33D chromatin structure
Date released
  • 30June, 2019
  • 3July, 2019
  • 2November, 2018
Available data
  • 243bam
  • 222bigWig
  • 203bed narrowPeak
  • 127bigBed narrowPeak
  • 118tagAlign
  • 47bed broadPeak
  • 38bigBed broadPeak
  • 35bed bed3+
  • 26tsv
  • 21fastq
  • 3hdf5
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 1bed bed3
  • 1tagAlign bed3+
Organism
  • 35Homo sapiens
Biosample type
  • 27tissue
  • 8primary cell
Organ
  • 78kidney
  • 36limb
  • 35brain
  • 34musculature of body
  • 30heart
  • 29pancreas
  • 27connective tissue
  • 21epithelium
  • 18ureter
  • 13liver
  • 13vasculature
  • 11blood vessel
  • 6adipose tissue
  • 4artery
  • 4eye
  • 3embryo
  • 2nerve
  • 2vein
  • 1spleen
Project
  • 35AMP
Genome assembly (visualization)
  • 32GRCh38
  • 25hg19
Lab
  • 35AMP-T2D consortium
BIOSAMPLE
ASSAY

35 results

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DNase-seq
Hi-C
tissue
brain14
frontal cortex2
Ammon's horn1
caudate nucleus1
cerebellar cortex1
primary cell
astrocyte of the cerebellum11
brain microvascular endothelial cell11
brain pericyte11
astrocyte of the hippocampus1
choroid plexus epithelial cell1
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