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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
88
candidate regulatory elements
78
target gene predictions
31
binding sites
25
histone modifications
15
variant allelic effects
7
chromatin state
3
eQTL
2
caQTL
1
pQTL
Date released
86
February, 2021
80
September, 2022
50
November, 2021
20
June, 2020
14
February, 2024
13
May, 2021
12
October, 2022
9
January, 2020
9
May, 2020
8
May, 2024
7
August, 2017
7
November, 2022
3
April, 2020
3
March, 2020
3
May, 2022
2
August, 2021
2
January, 2021
2
November, 2020
2
September, 2018
2
September, 2023
1
February, 2023
1
June, 2021
1
October, 2019
Available data
338
bed bed3+
65
tsv
55
bigWig
41
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
338
Homo sapiens
Biosample type
216
primary cell
49
tissue
44
in vitro differentiated cells
28
cell line
1
stem cell
Organ
557
epithelium
338
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
heart
175
limb
166
vasculature
165
skin of body
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
103
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
lymphoid tissue
lymphatic vessel
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
282
AMP
50
ENCODE
3
LungMap
2
T1D
1
ITG
Genome assembly (visualization)
337
hg19
75
GRCh38
organ_slims!
lymphatic vessel
lymphoid tissue
BIOSAMPLE
TYPE
338 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
binding sites
histone modifications
variant allelic effects
chromatin state
eQTL
caQTL
pQTL
primary cell
fibroblast
16
3
4
1
6
pericyte cell
10
3
10
foreskin fibroblast
1
6
2
4
2
osteoblast
5
2
2
3
2
fibroblast of lung
6
4
2
1
+ See 32 more…
tissue
adipose tissue
2
7
8
1
1
1
omental fat pad
2
5
2
subcutaneous adipose tissue
2
2
1
1
1
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
1
+ See 4 more…
in vitro differentiated cells
adipocyte
4
4
6
1
1
4
mesenchymal stem cell
1
3
3
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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