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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
252
candidate regulatory elements
183
target gene predictions
117
accessible chromatin
48
binding sites
42
histone modifications
19
variant allelic effects
12
chromatin state
3
eQTL
2
caQTL
1
pQTL
Date released
241
September, 2022
209
February, 2021
77
November, 2021
34
June, 2020
21
February, 2024
21
May, 2021
14
October, 2022
12
August, 2017
9
January, 2020
9
May, 2020
7
November, 2022
5
March, 2020
3
April, 2020
3
May, 2022
2
August, 2021
2
January, 2021
2
November, 2020
2
September, 2018
2
September, 2023
1
February, 2023
1
June, 2021
1
October, 2019
Available data
679
bed bed3+
122
bed bed9
70
bigWig
70
tsv
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
679
Homo sapiens
Biosample type
281
primary cell
241
tissue
104
cell line
52
in vitro differentiated cells
1
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
596
AMP
77
ENCODE
3
LungMap
2
T1D
1
ITG
Genome assembly (visualization)
678
hg19
96
GRCh38
BIOSAMPLE
TYPE
679 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
variant allelic effects
chromatin state
eQTL
caQTL
pQTL
primary cell
fibroblast
4
16
1
6
pericyte cell
1
10
10
foreskin fibroblast
6
2
1
4
2
foreskin keratinocyte
11
4
keratinocyte
3
5
2
1
2
1
1
+ See 47 more…
tissue
small intestine
29
17
1
large intestine
27
14
1
1
adipose tissue
7
8
2
1
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
+ See 25 more…
cell line
HT-29
2
2
1
1
1
GM23248
2
1
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
fibroblast of cardiac tissue
2
1
2
+ See 32 more…
in vitro differentiated cells
adipocyte
4
6
4
1
1
4
mesenchymal stem cell
3
3
1
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
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