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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
252
candidate regulatory elements
230
accessible chromatin
214
target gene predictions
55
binding sites
42
variant allelic effects
35
histone modifications
8
chromatin state
3
eQTL
2
caQTL
1
sQTL
Date released
268
September, 2022
195
February, 2021
124
November, 2021
62
February, 2024
33
June, 2020
25
May, 2021
22
January, 2021
17
May, 2020
15
January, 2020
15
November, 2022
12
August, 2021
11
February, 2023
10
October, 2022
8
April, 2020
7
August, 2017
6
March, 2020
6
October, 2019
2
May, 2022
2
November, 2019
1
April, 2019
1
June, 2021
Available data
842
bed bed3+
351
tsv
187
bigWig
132
bed bed9
78
txt
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
842
Homo sapiens
Biosample type
461
primary cell
252
tissue
112
cell line
17
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
688
AMP
124
ENCODE
22
T1D
8
LungMap
Genome assembly (visualization)
841
hg19
181
GRCh38
organ_slims!
small intestine
BIOSAMPLE
TYPE
842 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
variant allelic effects
histone modifications
chromatin state
eQTL
caQTL
sQTL
primary cell
endothelial cell
15
7
2
2
1
1
2
hepatocyte
1
8
3
1
2
4
endothelial cell of umbilical vein
6
2
4
2
1
foreskin keratinocyte
11
4
keratinocyte
3
2
5
1
1
2
1
+ See 97 more…
tissue
lung
33
17
left lung
26
13
right lung
22
1
11
pigmented layer of retina
20
pancreas
5
5
5
1
1
1
1
+ See 21 more…
cell line
A549
21
1
19
2
1
EndoC_BH1
8
1
1
IMR-90
2
1
2
2
1
PC-9
2
1
2
1
1
WI38
5
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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