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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
204
accessible chromatin
136
candidate regulatory elements
135
target gene predictions
46
binding sites
37
variant allelic effects
31
histone modifications
3
chromatin state
2
caQTL
2
eQTL
Date released
133
September, 2022
127
February, 2021
119
November, 2021
57
February, 2024
26
June, 2020
20
January, 2021
18
May, 2021
15
November, 2022
12
January, 2020
12
May, 2020
11
August, 2021
11
February, 2023
10
May, 2024
7
October, 2022
5
April, 2020
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
November, 2019
Available data
596
bed bed3+
324
tsv
169
bigWig
78
txt
65
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
596
Homo sapiens
Biosample type
447
primary cell
99
tissue
33
cell line
17
in vitro differentiated cells
Organ
557
epithelium
338
connective tissue
309
brain
309
kidney
281
musculature of body
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
heart
175
limb
166
vasculature
165
skin of body
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
103
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
452
AMP
119
ENCODE
20
T1D
5
LungMap
Genome assembly (visualization)
595
hg19
177
GRCh38
organ_slims!
lung
BIOSAMPLE
TYPE
596 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
binding sites
variant allelic effects
histone modifications
chromatin state
caQTL
eQTL
primary cell
endothelial cell
15
3
7
2
2
1
2
1
hepatocyte
8
2
3
1
2
4
endothelial cell of umbilical vein
2
6
4
2
1
foreskin keratinocyte
11
4
keratinocyte
2
3
5
1
1
2
1
+ See 92 more…
tissue
placenta
1
26
15
1
2
pigmented layer of retina
20
breast epithelium
1
5
3
esophagus squamous epithelium
1
6
2
kidney epithelium
1
1
+ See 13 more…
cell line
EndoC_BH1
8
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
HTR-8/Svneo
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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