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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 16DNase-seq
  • 3ChIP-seq
  • 2Hi-C
Assay category
  • 16DNA accessibility
  • 3DNA binding
  • 23D chromatin structure
Target of assay
  • 3histone
  • 3histone modification
  • 2narrow histone mark
  • 1broad histone mark
Date released
  • 14June, 2019
  • 3August, 2021
  • 2July, 2019
  • 2October, 2019
Available data
  • 317bam
  • 301bigWig
  • 257fastq
  • 156tsv
  • 151bed narrowPeak
  • 80zippedFastqFolder
  • 76bigBed narrowPeak
  • 22bed broadPeak
  • 22bigBed broadPeak
  • 21bed bed3+
  • 7tagAlign
  • 6bed bedMethyl
  • 6bigBed bedMethyl
  • 6hic
  • 5bedpe bed3+
  • 3cool
  • 2hdf5
  • 1tar
Organism
  • 21Homo sapiens
Biosample type
  • 21primary cell
Organ
  • 78kidney
  • 36limb
  • 35brain
  • 34musculature of body
  • 30heart
  • 29pancreas
  • 27connective tissue
  • 21epithelium
  • 18ureter
  • 13liver
  • 13vasculature
  • 11blood vessel
  • 6adipose tissue
  • 4artery
  • 4eye
  • 3embryo
  • 2nerve
  • 2vein
  • 1spleen
Project
  • 21AMP
Genome assembly (visualization)
  • 19GRCh38
  • 15hg19
Lab
  • 21AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

21 results

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Clear Filters
DNase-seq
ChIP-seq
Hi-C
primary cell
hepatocyte13
brain microvascular endothelial cell11
endothelial cell of umbilical vein2
glomerular visceral epithelial cell2
kidney tubule cell2
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