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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
298
candidate regulatory elements
216
target gene predictions
77
accessible chromatin
17
binding sites
16
histone modifications
16
variant allelic effects
4
chromatin state
2
eQTL
Date released
281
September, 2022
186
February, 2021
60
February, 2024
28
June, 2020
28
November, 2021
16
August, 2021
14
January, 2020
14
May, 2020
8
May, 2021
4
August, 2017
4
October, 2022
3
March, 2020
Available data
646
bed bed3+
258
tsv
143
bed bed9
87
txt
50
bigWig
2
bigBed bed9
Organism
646
Homo sapiens
Biosample type
433
tissue
123
cell line
89
primary cell
1
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
618
AMP
28
ENCODE
Genome assembly (visualization)
646
hg19
105
GRCh38
BIOSAMPLE
TYPE
646 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
variant allelic effects
chromatin state
eQTL
tissue
kidney
29
14
10
1
2
1
1
small intestine
29
17
1
large intestine
27
14
1
1
renal cortex interstitium
20
9
1
1
renal pelvis
19
9
2
1
+ See 33 more…
cell line
HeLa-S3
5
55
1
HEK293
3
1
1
2
1
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
+ See 14 more…
primary cell
kidney tubule cell
3
2
2
colon epithelial cell
3
3
enterocyte
3
3
epithelial cell of proximal tubule
2
1
1
1
1
renal cortical epithelial cell
2
1
2
1
+ See 24 more…
in vitro differentiated cells
renal cell carcinoma
1
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