Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
251
candidate regulatory elements
145
target gene predictions
45
accessible chromatin
13
histone modifications
10
binding sites
9
variant allelic effects
3
chromatin state
2
caQTL
2
eQTL
Date released
246
September, 2022
149
February, 2021
23
November, 2021
16
June, 2020
11
February, 2024
11
May, 2021
5
January, 2020
5
May, 2020
4
March, 2020
4
October, 2022
3
August, 2017
3
May, 2022
Available data
480
bed bed3+
126
bed bed9
24
bigWig
16
tsv
3
bigBed bed9
Organism
480
Homo sapiens
Biosample type
374
tissue
84
primary cell
16
cell line
6
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
457
AMP
23
ENCODE
Genome assembly (visualization)
480
hg19
28
GRCh38
BIOSAMPLE
TYPE
480 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
tissue
stomach
40
21
3
1
muscle of arm
33
16
1
1
placenta
26
15
1
2
1
muscle of leg
27
14
2
muscle of back
28
13
+ See 24 more…
primary cell
trophoblast cell
7
5
1
1
skeletal muscle satellite cell
2
2
5
fibroblast of villous mesenchyme
2
1
1
1
2
skeletal muscle fiber
5
2
type I muscle cell
1
3
1
1
+ See 19 more…
cell line
LHCN-M2
2
1
1
1
1
A673
2
2
SJCRH30
2
1
1
HTR-8/Svneo
1
1
in vitro differentiated cells
trophoblast cell
2
2
myotube
1
1
See all biosamples
Download