Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 59accessible chromatin
  • 18candidate regulatory elements
  • 9target gene predictions
  • 6binding sites
  • 4histone modifications
  • 2variant allelic effects
  • 1eQTL
Date released
  • 24February, 2023
  • 22November, 2022
  • 18September, 2022
  • 17February, 2021
  • 6June, 2020
  • 4November, 2021
  • 2January, 2020
  • 2May, 2020
  • 2October, 2022
  • 1February, 2020
  • 1February, 2024
Available data
  • 99bed bed3+
  • 36bigWig
  • 9bed bed9
  • 2tsv
Organism
  • 99Homo sapiens
Collection Tags
  • 47CMDGA
  • 18EpiMap
  • 14ChIP-Atlas
  • 11ENCODE
  • 4AMP
  • 4T2DKP
  • 2DGA
Biosample type
  • 64tissue
  • 20primary cell
  • 9cell line
  • 6in vitro differentiated cells
Organ
  • 557epithelium
  • 347connective tissue
  • 326brain
  • 311kidney
  • 284musculature of body
  • 240lung
  • 231intestine
  • 192bodily fluid
  • 183blood
  • 178embryo
  • 178heart
  • 177limb
  • 171pancreas
  • 169vasculature
  • 168skin of body
  • 139large intestine
  • 126blood vessel
  • 113extraembryonic component
  • 108liver
  • 99eye
  • 94stomach
  • 77uterus
  • 73mammary gland
  • 70bone element
  • 65small intestine
  • 64prostate gland
  • 58adrenal gland
  • 57placenta
  • 55adipose tissue
  • 54lymph node
  • 54penis
  • 51ureter
  • 49artery
  • 40gonad
  • 38thymus
  • 36esophagus
  • 30spinal cord
  • 27spleen
  • 21testis
  • 18lymphoid tissue
  • 18ovary
  • 18thyroid gland
  • 17lymphatic vessel
  • 17vein
  • 15nerve
  • 15skeleton
  • 14bronchus
  • 14mouth
  • 12pituitary gland
  • 11bone marrow
  • 10breast
  • 7tongue
  • 7urinary bladder
  • 7vagina
  • 5trachea
  • 3nose
Project
  • 95AMP
  • 4ENCODE
Genome assembly (visualization)
  • 98hg19
  • 7GRCh38
BIOSAMPLE
TYPE

99 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
binding sites
histone modifications
variant allelic effects
eQTL
tissue
retina23631111
pigmented layer of retina20
eye142
corneal epithelium1
primary cell
retinal pigment epithelial cell32121
iris pigment epithelial cell121
fibroblast of the conjunctiva21
Muller cell2
retinal pigment epithelial cell1
cell line
WERI-Rb-112121
fibroblast of the conjunctiva1
retinal cell1
in vitro differentiated cells
retinal pigment epithelial cell6
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego