Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 96target gene predictions
  • 69candidate regulatory elements
  • 10accessible chromatin
  • 6binding sites
  • 5histone modifications
  • 3chromatin state
  • 2eQTL
Date released
  • 65September, 2022
  • 52July, 2026
  • 46February, 2021
  • 7June, 2020
  • 6November, 2021
  • 5May, 2021
  • 3August, 2017
  • 3February, 2024
  • 2January, 2022
  • 1March, 2020
  • 1October, 2022
Available data
  • 191bed bed3+
  • 33bed bed9
  • 3bigWig
  • 2tsv
Organism
  • 191Homo sapiens
Collection Tags
  • 66EpiMap
  • 52ENCODE-rE2G
  • 37ENCODE
  • 17ChIP-Atlas
  • 6AMP
  • 6DGA
  • 6T2DKP
  • 24DN
  • 2T1D
  • 2T2D
  • 2eQTLCatalogue
Biosample type
  • 131tissue
  • 54cell line
  • 6primary cell
Organ
  • 744brain
  • 706blood
  • 548epithelium
  • 398kidney
  • 369lung
  • 344connective tissue
  • 300intestine
  • 295heart
  • 284musculature of body
  • 260skin of body
  • 192bodily fluid
  • 191large intestine
  • 189pancreas
  • 178embryo
  • 177limb
  • 166vasculature
  • 161liver
  • 151eye
  • 141extraembryonic component
  • 139blood vessel
  • 115stomach
  • 111muscle organ
  • 90mammary gland
  • 87adrenal gland
  • 87uterus
  • 85bone element
  • 82thymus
  • 81placenta
  • 78small intestine
  • 73prostate gland
  • 60ureter
  • 59adipose tissue
  • 56spleen
  • 54artery
  • 54gonad
  • 54lymph node
  • 54penis
  • 42thyroid gland
  • 39esophagus
  • 36spinal cord
  • 27ovary
  • 26testis
  • 19skeleton
  • 18lymphoid tissue
  • 18vein
  • 16mouth
  • 15nerve
  • 14bronchus
  • 14lymphatic vessel
  • 12breast
  • 12pituitary gland
  • 11bone marrow
  • 10urinary bladder
  • 9tongue
  • 9vagina
  • 5trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
Project
  • 185AMP
  • 6ENCODE
Genome assembly (visualization)
  • 137hg19
  • 62GRCh38
BIOSAMPLE
TYPE

191 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
tissue
large intestine282711
sigmoid colon10101
transverse colon9811
colonic mucosa4411
mucosa of rectum241
cell line
HCT116192
HT-2932111
SW48022111
RKO11111
Caco-231
primary cell
colon epithelial cell33
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego