Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 131candidate regulatory elements
  • 78target gene predictions
  • 15accessible chromatin
  • 9binding sites
  • 4histone modifications
  • 1chromatin state
  • 1eQTL
  • 1variant allelic effects
Date released
  • 140September, 2022
  • 70February, 2021
  • 9November, 2021
  • 6June, 2020
  • 4May, 2021
  • 4October, 2022
  • 3April, 2020
  • 1August, 2017
  • 1February, 2024
  • 1January, 2022
  • 1March, 2020
Available data
  • 240bed bed3+
  • 70bed bed9
  • 9bigWig
  • 1tsv
Organism
  • 240Homo sapiens
Collection Tags
  • 140EpiMap
  • 65ENCODE
  • 15ChIP-Atlas
  • 9AMP
  • 9T2DKP
  • 6DGA
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 137tissue
  • 73cell line
  • 30primary cell
Organ
  • 557epithelium
  • 347connective tissue
  • 326brain
  • 311kidney
  • 284musculature of body
  • 240lung
  • 231intestine
  • 192bodily fluid
  • 183blood
  • 178embryo
  • 178heart
  • 177limb
  • 171pancreas
  • 169vasculature
  • 168skin of body
  • 139large intestine
  • 126blood vessel
  • 113extraembryonic component
  • 108liver
  • 99eye
  • 94stomach
  • 77uterus
  • 73mammary gland
  • 70bone element
  • 65small intestine
  • 64prostate gland
  • 58adrenal gland
  • 57placenta
  • 55adipose tissue
  • 54lymph node
  • 54penis
  • 51ureter
  • 49artery
  • 40gonad
  • 38thymus
  • 36esophagus
  • 30spinal cord
  • 27spleen
  • 21testis
  • 18lymphoid tissue
  • 18ovary
  • 18thyroid gland
  • 17lymphatic vessel
  • 17vein
  • 15nerve
  • 15skeleton
  • 14bronchus
  • 14mouth
  • 12pituitary gland
  • 11bone marrow
  • 10breast
  • 7tongue
  • 7urinary bladder
  • 7vagina
  • 5trachea
  • 3nose
Project
  • 228AMP
  • 9ENCODE
  • 3LungMap
Genome assembly (visualization)
  • 239hg19
  • 10GRCh38
BIOSAMPLE
TYPE

240 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
eQTL
variant allelic effects
tissue
lung33171
left lung2613
right lung22111
upper lobe of left lung73111
cell line
A5492119121
IMR-9022121
PC-922111
WI3851
NCI-H226 cell111
primary cell
fibroblast of lung6421
type II pneumocyte241
lung microvascular endothelial cell31
type I pneumocyte13
endothelial cell of artery1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego