Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
57
candidate regulatory elements
28
target gene predictions
10
binding sites
8
histone modifications
7
accessible chromatin
Date released
52
September, 2022
46
February, 2021
5
June, 2020
3
October, 2022
2
May, 2021
2
November, 2021
Available data
110
bed bed3+
26
bed bed9
2
bigWig
Organism
110
Homo sapiens
Biosample type
47
tissue
44
primary cell
13
cell line
6
in vitro differentiated cells
Organ
557
epithelium
338
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
heart
175
limb
166
vasculature
165
skin of body
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
103
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
lymphatic vessel
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
vagina
5
trachea
3
nose
Project
108
AMP
2
ENCODE
Genome assembly (visualization)
110
hg19
2
GRCh38
organ_slims!
vagina
BIOSAMPLE
TYPE
110 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
accessible chromatin
tissue
placenta
26
15
1
2
1
skin of prepuce of penis
1
1
primary cell
foreskin fibroblast
6
2
4
2
1
foreskin keratinocyte
11
4
fibroblast of villous mesenchyme
2
1
2
1
1
foreskin melanocyte
4
1
placental hematopoietic stem cell
1
+ See 1 more…
cell line
EH
2
1
EL
2
1
ELR
2
1
HTR-8/Svneo
1
1
foreskin fibroblast
1
1
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
See all biosamples
Download