Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 37candidate regulatory elements
  • 36target gene predictions
  • 3accessible chromatin
  • 1chromatin state
  • 1eQTL
Date released
  • 38September, 2022
  • 18February, 2021
  • 13July, 2026
  • 4November, 2021
  • 1August, 2017
  • 1January, 2022
  • 1June, 2020
  • 1March, 2020
  • 1May, 2021
Available data
  • 78bed bed3+
  • 19bed bed9
  • 2bigWig
Organism
  • 78Homo sapiens
Collection Tags
  • 38EpiMap
  • 18ENCODE
  • 13ENCODE-rE2G
  • 4AMP
  • 4T2DKP
  • 2DGA
  • 1ChIP-Atlas
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 74tissue
  • 4primary cell
Organ
  • 744brain
  • 706blood
  • 548epithelium
  • 398kidney
  • 369lung
  • 344connective tissue
  • 300intestine
  • 295heart
  • 284musculature of body
  • 260skin of body
  • 192bodily fluid
  • 191large intestine
  • 189pancreas
  • 178embryo
  • 177limb
  • 166vasculature
  • 161liver
  • 151eye
  • 141extraembryonic component
  • 139blood vessel
  • 115stomach
  • 111muscle organ
  • 90mammary gland
  • 87adrenal gland
  • 87uterus
  • 85bone element
  • 82thymus
  • 81placenta
  • 78small intestine
  • 73prostate gland
  • 60ureter
  • 59adipose tissue
  • 56spleen
  • 54artery
  • 54gonad
  • 54lymph node
  • 54penis
  • 42thyroid gland
  • 39esophagus
  • 36spinal cord
  • 27ovary
  • 26testis
  • 19skeleton
  • 18lymphoid tissue
  • 18vein
  • 16mouth
  • 15nerve
  • 14bronchus
  • 14lymphatic vessel
  • 12breast
  • 12pituitary gland
  • 11bone marrow
  • 10urinary bladder
  • 9tongue
  • 9vagina
  • 5trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
Project
  • 74AMP
  • 4ENCODE
Genome assembly (visualization)
  • 64hg19
  • 18GRCh38
BIOSAMPLE
TYPE

78 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
eQTL
tissue
small intestine293011
duodenal mucosa421
muscle layer of duodenum42
primary cell
enterocyte of epithelium of small intestine11
small intestine goblet cell11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego