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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
162
DNase-seq
2
total RNA-seq
1
ATAC-seq
1
ChIP-seq
Assay category
163
DNA accessibility
2
Transcription
1
DNA binding
Target of assay
1
RNA binding protein
1
transcription factor
Date released
148
June, 2019
8
November, 2018
5
October, 2019
2
May, 2021
1
August, 2017
1
February, 2023
1
November, 2020
Available data
2233
bam
2091
bigWig
1229
tsv
1089
bed narrowPeak
728
fastq
513
bigBed narrowPeak
256
tagAlign
197
bed broadPeak
166
bed bed3+
162
bigBed broadPeak
153
txt
153
zippedFastqFolder
64
xls
16
bed bedMethyl
16
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
vcf
Organism
166
Homo sapiens
Biosample type
155
tissue
10
primary cell
1
in vitro differentiated cells
Organ
67
kidney
36
limb
33
musculature of body
21
heart
18
brain
18
ureter
7
blood vessel
7
pancreas
7
vasculature
6
connective tissue
4
artery
4
epithelium
4
liver
2
adipose tissue
2
nerve
1
eye
1
spleen
1
vein
Project
166
AMP
Genome assembly (visualization)
163
GRCh38
156
hg19
Lab
164
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
166 results
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Clear Filters
DNase-seq
total RNA-seq
ATAC-seq
ChIP-seq
tissue
muscle of arm
17
heart
14
muscle of leg
13
brain
12
kidney
11
+ See 32 more…
primary cell
CD8-positive, alpha-beta T cell
2
brain pericyte
1
endothelial cell of umbilical vein
1
hepatic stellate cell
1
hepatocyte
1
+ See 4 more…
in vitro differentiated cells
immature adipocyte
1
See all biosamples
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