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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 25ChIP-seq
Assay category
  • 25DNA binding
Target of assay
  • 25histone
  • 25histone modification
  • 19transcription factor
  • 13narrow histone mark
  • 12broad histone mark
  • 9control
  • 2RNA binding protein
Date released
  • 12August, 2017
  • 10December, 2017
  • 3August, 2021
Available data
  • 869bigWig
  • 851bed narrowPeak
  • 785bam
  • 391bigBed narrowPeak
  • 321tagAlign
  • 230fastq
  • 65bed broadPeak
  • 30bigBed broadPeak
  • 25bed bed3+
  • 1tagAlign bed3+
Organism
  • 25Homo sapiens
Biosample type
  • 12tissue
  • 8in vitro differentiated cells
  • 3primary cell
  • 2stem cell
Organ
  • 12pancreas
  • 3epithelium
  • 3liver
  • 2embryo
Project
  • 25AMP
Genome assembly (visualization)
  • 25GRCh38
  • 25hg19
Lab
  • 25AMP-T2D consortium
Audit category:
  • 4missing controlled_by
Audit category:
  • 6inconsistent control read length
BIOSAMPLE
ASSAY

25 results

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Clear Filters
ChIP-seq
tissue
islet of Langerhans12
in vitro differentiated cells
Posterior foregut2
definitive endodermal cell2
pancreatic endoderm2
primitive gut cell2
primary cell
hepatocyte3
stem cell
hESC2
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