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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
Assay category
11
DNA accessibility
Date released
10
February, 2023
1
February, 2021
Available data
3092
bam
bigWig
1593
tsv
1547
bed narrowPeak
1358
fastq
780
bigBed narrowPeak
398
tagAlign
161
txt
153
zippedFastqFolder
131
bed broadPeak
94
bigBed broadPeak
82
bed bed3+
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
11
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
tissue
1
cell line
Organ
5
connective tissue
4
bone element
4
skeleton
1
brain
1
liver
Project
11
AMP
Genome assembly (visualization)
11
hg19
1
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent replicate
files.file_type!
bigWig
month_released!
June, 2019
organ_slims!
limb
BIOSAMPLE
ASSAY
11 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
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