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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
9
WGBS
4
RRBS
Assay category
13
DNA methylation
12
DNA accessibility
Date released
July, 2019
10
February, 2023
7
November, 2018
6
August, 2017
2
February, 2021
Available data
3231
bam
3019
bigWig
1745
bed narrowPeak
1535
tsv
1358
fastq
976
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
269
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
13
bed bedMethyl
13
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
25
Homo sapiens
Biosample type
16
tissue
5
in vitro differentiated cells
2
cell line
2
primary cell
Organ
8
connective tissue
4
bone element
4
pancreas
4
skeleton
3
liver
2
adipose tissue
2
musculature of body
2
spleen
1
brain
Project
25
AMP
Genome assembly (visualization)
16
hg19
11
GRCh38
Lab
25
AMP-T2D consortium
Audit category:
1
inconsistent replicate
month_released!
April, 2019
July, 2019
BIOSAMPLE
ASSAY
25 results
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ATAC-seq
WGBS
RRBS
tissue
adipose tissue
2
body of pancreas
2
pancreas
2
skeletal muscle tissue
2
spleen
2
+ See 6 more…
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
1
primary cell
osteoblast
1
skeletal muscle myoblast
1
See all biosamples
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