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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
12
ATAC-seq
Assay category
28
DNA binding
12
DNA accessibility
Target of assay
28
histone
28
histone modification
16
broad histone mark
12
narrow histone mark
Date released
20
August, 2017
10
February, 2023
6
November, 2017
2
February, 2021
2
October, 2019
Available data
3392
bam
3169
bigWig
1817
bed narrowPeak
1600
tsv
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
tagAlign bed3+
1
vcf
Organism
40
Homo sapiens
Biosample type
31
tissue
5
in vitro differentiated cells
3
primary cell
1
cell line
Organ
13
musculature of body
7
brain
7
connective tissue
6
pancreas
4
bone element
4
skeleton
2
blood vessel
2
epithelium
2
vasculature
2
vein
1
adipose tissue
1
liver
Project
40
AMP
Genome assembly (visualization)
40
hg19
7
GRCh38
Lab
40
AMP-T2D consortium
Audit category:
1
inconsistent replicate
files.file_type!
bed bed3+
fastq
tagAlign bed3+
BIOSAMPLE
ASSAY
40 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
cingulate gyrus
2
middle frontal area 46
2
acetabular part of hip bone
1
+ See 7 more…
in vitro differentiated cells
chondrocyte
5
primary cell
endothelial cell of umbilical vein
2
osteoblast
1
cell line
HepG2
1
See all biosamples
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