Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
total RNA-seq
2
Hi-C
2
small RNA-seq
1
pCHi-C
Assay category
8
Transcription
2
3D chromatin structure
Date released
5
March, 2020
4
July, 2019
2
February, 2020
Available data
68
bigWig
60
bed narrowPeak
57
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
0
bed bed3
Organism
11
Homo sapiens
Biosample type
9
tissue
2
primary cell
Organ
485
connective tissue
424
pancreas
402
adipose tissue
177
liver
171
heart
161
epithelium
70
blood vessel
70
vasculature
62
bone element
58
artery
27
brain
24
kidney
14
embryo
11
musculature of body
7
limb
5
eye
5
nerve
4
skeleton
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
11
AMP
Genome assembly (visualization)
8
hg19
6
GRCh38
Lab
11
AMP-T2D consortium
month_released!
December, 2017
BIOSAMPLE
ASSAY
11 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
Hi-C
small RNA-seq
pCHi-C
tissue
psoas muscle
2
2
1
skeletal muscle tissue
1
1
gastrocnemius medialis
1
left ventricle myocardium
1
primary cell
skeletal muscle satellite cell
1
1
Download