Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
14
WGBS
12
ATAC-seq
Assay category
33
DNA methylation
12
DNA accessibility
Date released
22
July, 2019
10
February, 2023
7
November, 2018
4
August, 2017
2
February, 2021
Available data
2654
bam
2499
bigWig
1571
bed narrowPeak
1314
fastq
1180
tsv
925
bigBed narrowPeak
341
tagAlign
278
bed broadPeak
242
bigBed broadPeak
227
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
19
bedpe bed3+
19
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
vcf
Organism
45
Homo sapiens
Biosample type
27
tissue
11
primary cell
5
in vitro differentiated cells
2
cell line
Organ
9
connective tissue
8
heart
6
epithelium
6
pancreas
4
bone element
4
kidney
4
liver
4
musculature of body
4
skeleton
3
brain
adipose tissue
2
spleen
2
vasculature
1
blood vessel
1
eye
limb
1
pericardium
Project
45
AMP
Genome assembly (visualization)
31
hg19
16
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
inconsistent replicate
month_released!
October, 2019
organ_slims!
adipose tissue
limb
BIOSAMPLE
ASSAY
45 results
search-icon
table-tab-icon
Clear Filters
RRBS
WGBS
ATAC-seq
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
brain
1
1
heart right ventricle
2
+ See 13 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 6 more…
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
1
See all biosamples
Download