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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ATAC-seq
Assay category
13
DNA accessibility
Date released
10
February, 2023
3
October, 2019
Available data
bam
3084
bigWig
1810
bed narrowPeak
1535
tsv
1358
fastq
1040
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
269
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
bedpe bed3+
23
hic
13
bed bedMethyl
13
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
13
Homo sapiens
Biosample type
7
in vitro differentiated cells
6
tissue
Organ
8
connective tissue
4
bone element
4
skeleton
1
adipose tissue
1
brain
Project
13
AMP
Genome assembly (visualization)
13
hg19
Lab
13
AMP-T2D consortium
files.file_type!
bam
bedpe bed3+
month_released!
July, 2019
BIOSAMPLE
ASSAY
13 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
adipocyte
2
tissue
acetabular part of hip bone
1
adipose tissue
1
brain
1
ilium
1
ischium
1
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