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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
12
total RNA-seq
1
GRO-seq
Assay category
14
DNA binding
12
Transcription
Target of assay
11
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
transcription factor
Date released
10
February, 2018
8
August, 2021
8
December, 2017
May, 2021
1
January, 2018
Available data
34
bam
27
bigWig
27
fastq
14
bed narrowPeak
12
tsv
3
bed bed3+
0
bed bed3
Organism
27
Homo sapiens
Biosample type
19
in vitro differentiated cells
8
cell line
Organ
623
liver
580
pancreas
574
connective tissue
425
adipose tissue
292
epithelium
223
brain
221
heart
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
62
bone element
55
blood
55
bodily fluid
31
nerve
27
embryo
18
ureter
16
spleen
15
vein
6
eye
4
skeleton
1
pericardium
1
pituitary gland
Project
27
AMP
Genome assembly (visualization)
26
GRCh38
26
hg19
1
hg18
Lab
27
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
inconsistent control read length
month_released!
May, 2021
organ_slims!
thymus
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
12
4
1
Hepatic endoderm
2
cell line
H1-hESC
8
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