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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 12ATAC-seq
Assay category
  • 12DNA accessibility
Date released
  • 10February, 2023
  • 2February, 2021
Available data
  • 3019bam
  • 2851bigWig
  • 1637bed narrowPeak
  • 1454tsv
  • 903fastq
  • 895bigBed narrowPeak
  • 398tagAlign
  • 310bed broadPeak
  • 275bigBed broadPeak
  • 265bed bed3+
  • 155txt
  • 64xls
  • 31bed bedMethyl
  • 31bigBed bedMethyl
  • 23hic
  • 22bedpe bed3+
  • 18zippedFastqFolder
  • 12bed bed3
  • 7bed bedgraph
  • 6csv
  • 5hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 12Homo sapiens
Biosample type
  • 5in vitro differentiated cells
  • 5tissue
  • 1cell line
  • 1primary cell
Organ
  • 6connective tissue
  • 4bone element
  • 4skeleton
  • 1brain
  • 1liver
Project
  • 12AMP
Genome assembly (visualization)
  • 12hg19
  • 2GRCh38
Lab
  • 12AMP-T2D consortium
Audit category:
  • 1inconsistent replicate
files.run_type!
  • paired-ended
BIOSAMPLE
ASSAY

12 results

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Clear Filters
ATAC-seq
in vitro differentiated cells
chondrocyte5
tissue
acetabular part of hip bone1
brain1
ilium1
ischium1
pubis1
cell line
HepG21
primary cell
osteoblast1
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