Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ATAC-seq
Assay category
11
DNA accessibility
Date released
9
February, 2023
2
February, 2021
Available data
3016
bam
2831
bigWig
1563
tsv
1509
bed narrowPeak
1274
fastq
823
bigBed narrowPeak
265
tagAlign
228
bed broadPeak
214
bigBed broadPeak
204
bed bed3+
160
txt
153
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
hdf5
2
ibed
1
bedpe
1
vcf
Organism
11
Homo sapiens
Biosample type
5
in vitro differentiated cells
4
tissue
1
cell line
1
primary cell
Organ
6
connective tissue
4
bone element
4
skeleton
brain
1
liver
Project
11
AMP
Genome assembly (visualization)
11
hg19
2
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent replicate
lab.title!
Stephen Parker, UMich
month_released!
October, 2018
organ_slims!
brain
musculature of body
BIOSAMPLE
ASSAY
11 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
primary cell
osteoblast
1
Download