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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
13
WGBS
Assay category
31
DNA methylation
Date released
22
July, 2019
5
November, 2018
4
August, 2017
Available data
2755
bam
2568
bigWig
1715
bed narrowPeak
1233
fastq
1121
tsv
988
bigBed narrowPeak
376
tagAlign
307
bed broadPeak
bigBed broadPeak
243
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
31
bed bedMethyl
31
bigBed bedMethyl
21
bedpe bed3+
21
hic
8
csv
6
bed bed3
4
hdf5
3
bed bedgraph
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
31
Homo sapiens
Biosample type
21
tissue
9
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
connective tissue
3
liver
2
adipose tissue
2
brain
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
31
AMP
Genome assembly (visualization)
18
hg19
13
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bigBed broadPeak
organ_slims!
connective tissue
spleen
vein
BIOSAMPLE
ASSAY
31 results
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Clear Filters
RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
skeletal muscle tissue
2
+ See 9 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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