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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
WGBS
15
RRBS
Assay category
32
DNA methylation
Date released
19
July, 2019
7
November, 2018
6
August, 2017
Available data
3199
bam
2991
bigWig
1592
bed narrowPeak
1453
tsv
1358
fastq
938
bigBed narrowPeak
374
tagAlign
244
bed broadPeak
207
bigBed broadPeak
190
bed bed3+
153
zippedFastqFolder
99
txt
32
bed bedMethyl
32
bigBed bedMethyl
21
bedpe bed3+
21
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
csv
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
32
Homo sapiens
Biosample type
24
tissue
7
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
32
AMP
Genome assembly (visualization)
17
GRCh38
15
hg19
Lab
32
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
csv
month_released!
August, 2021
organ_slims!
kidney
BIOSAMPLE
ASSAY
32 results
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WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
retinal pigment epithelial cell
1
+ See 2 more…
cell line
HepG2
1
See all biosamples
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