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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 15RRBS
  • 8WGBS
Assay category
  • 23DNA methylation
Date released
  • 23July, 2019
Available data
  • 3392bam
  • 3169bigWig
  • 1817bed narrowPeak
  • 1600tsv
  • fastq
  • 1042bigBed narrowPeak
  • 398tagAlign
  • 322bed broadPeak
  • 285bigBed broadPeak
  • 273bed bed3+
  • 161txt
  • 153zippedFastqFolder
  • 64xls
  • 36bed bedMethyl
  • 36bigBed bedMethyl
  • 23bedpe bed3+
  • 23hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 23Homo sapiens
Biosample type
  • 14tissue
  • 9primary cell
Organ
  • 8heart
  • 6epithelium
  • 4kidney
  • 2brain
  • 2musculature of body
  • 2pancreas
  • 2vasculature
  • 1blood vessel
  • 1connective tissue
  • 1eye
  • 1limb
  • 1liver
  • 1pericardium
Project
  • 23AMP
Genome assembly (visualization)
  • 15hg19
  • 8GRCh38
Lab
  • 23AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.file_type!
  • fastq
BIOSAMPLE
ASSAY

23 results

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Clear Filters
RRBS
WGBS
tissue
heart left ventricle12
heart right ventricle2
aorta1
brain1
heart1
primary cell
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
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