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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 19RRBS
  • 17WGBS
Assay category
  • 36DNA methylation
Date released
  • 23July, 2019
  • 7November, 2018
  • 6August, 2017
Available data
  • 3392bam
  • 3169bigWig
  • 1817bed narrowPeak
  • 1600tsv
  • 1358fastq
  • 1042bigBed narrowPeak
  • 398tagAlign
  • 322bed broadPeak
  • 285bigBed broadPeak
  • 273bed bed3+
  • 161txt
  • 153zippedFastqFolder
  • xls
  • 36bed bedMethyl
  • 36bigBed bedMethyl
  • 23bedpe bed3+
  • 23hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 36Homo sapiens
Biosample type
  • 25tissue
  • 10primary cell
  • 1cell line
Organ
  • 8heart
  • 6epithelium
  • 6pancreas
  • 4kidney
  • 4musculature of body
  • 3connective tissue
  • 3liver
  • 2adipose tissue
  • 2brain
  • 2spleen
  • 2vasculature
  • 1blood vessel
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 36AMP
Genome assembly (visualization)
  • 19hg19
  • 17GRCh38
Lab
  • 36AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.file_type!
  • xls
BIOSAMPLE
ASSAY

36 results

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Clear Filters
RRBS
WGBS
tissue
heart left ventricle12
pancreas12
adipose tissue2
body of pancreas2
heart right ventricle2
primary cell
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
cell line
HepG21
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