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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ATAC-seq
43
ChIP-seq
4
DNase-seq
1
WGBS
Assay category
49
DNA accessibility
43
DNA binding
1
DNA methylation
Target of assay
36
histone
36
histone modification
22
broad histone mark
14
narrow histone mark
7
transcription factor
3
RNA binding protein
Date released
39
May, 2019
35
February, 2023
12
February, 2021
4
June, 2019
3
July, 2019
Available data
129
bam
107
bigWig
92
bed narrowPeak
66
tsv
43
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
93
Homo sapiens
Biosample type
80
tissue
12
cell line
1
primary cell
Organ
444
liver
220
pancreas
205
brain
199
heart
187
kidney
epithelium
135
vasculature
130
blood vessel
limb
78
connective tissue
74
artery
64
musculature of body
54
blood
54
bodily fluid
34
eye
27
nerve
18
ureter
16
spleen
15
adipose tissue
14
embryo
13
vein
8
bone element
8
skeleton
1
pericardium
1
pituitary gland
Project
93
AMP
Genome assembly (visualization)
93
GRCh38
57
hg19
Lab
93
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
epithelium
limb
BIOSAMPLE
ASSAY
93 results
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Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
WGBS
tissue
coronary artery
36
3
2
ascending aorta
13
1
thoracic aorta
1
12
aorta
11
1
cell line
smooth muscle cell of the coronary artery
8
4
primary cell
smooth muscle cell of the brain vasculature
1
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