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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
15
WGBS
3
single cell RNA-seq
Assay category
34
DNA methylation
3
Transcription
Date released
23
July, 2019
8
November, 2018
4
August, 2017
1
February, 2021
1
September, 2018
Available data
2167
bam
1878
bigWig
tsv
1086
fastq
956
bed narrowPeak
642
bigBed narrowPeak
255
bed broadPeak
253
bigBed broadPeak
242
bed bed3+
161
txt
153
zippedFastqFolder
76
tagAlign
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
hic
22
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
37
Homo sapiens
Biosample type
24
tissue
12
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
liver
4
musculature of body
3
connective tissue
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
37
AMP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
tsv
organ_slims!
adipose tissue
target.investigated_as!
histone
BIOSAMPLE
ASSAY
37 results
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Clear Filters
RRBS
WGBS
single cell RNA-seq
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
liver
1
1
+ See 10 more…
primary cell
pancreatic cell
2
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
cell line
HepG2
1
See all biosamples
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