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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
8
WGBS
Assay category
23
DNA methylation
Date released
23
July, 2019
March, 2020
Available data
3376
bam
3149
bigWig
1814
bed narrowPeak
1555
tsv
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
13
hic
12
bed bed3
11
bedpe bed3+
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
0
ibed
Organism
23
Homo sapiens
Biosample type
14
tissue
9
primary cell
Organ
8
heart
6
epithelium
4
kidney
2
brain
2
musculature of body
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
limb
1
liver
1
pericardium
Project
23
AMP
Genome assembly (visualization)
15
hg19
8
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
fastq
month_released!
March, 2020
BIOSAMPLE
ASSAY
23 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
heart right ventricle
2
aorta
1
brain
1
heart
1
+ See 6 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
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