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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
RRBS
15
WGBS
3
ChIP-seq
1
FAIRE-seq
Assay category
31
DNA methylation
3
DNA binding
1
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
20
July, 2019
7
November, 2018
4
August, 2017
3
November, 2017
1
October, 2019
Available data
2463
bam
2307
bigWig
1468
bed narrowPeak
1142
fastq
1096
tsv
838
bigBed narrowPeak
266
bed broadPeak
258
tagAlign
239
bigBed broadPeak
198
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
31
bed bedMethyl
31
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
5
bed bed3
4
tar
3
bed bedgraph
3
cool
2
hdf5
2
ibed
1
bedpe
1
vcf
Organism
35
Homo sapiens
Biosample type
22
tissue
9
primary cell
4
cell line
Organ
8
heart
7
epithelium
6
liver
6
pancreas
4
kidney
4
musculature of body
connective tissue
3
vasculature
2
adipose tissue
2
blood vessel
brain
2
spleen
1
eye
1
limb
1
pericardium
1
vein
Project
35
AMP
Genome assembly (visualization)
20
hg19
15
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
December, 2017
organ_slims!
brain
connective tissue
BIOSAMPLE
ASSAY
35 results
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Clear Filters
RRBS
WGBS
ChIP-seq
FAIRE-seq
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
skeletal muscle tissue
2
+ See 9 more…
primary cell
cardiac muscle cell
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
cell line
HepG2
1
3
See all biosamples
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