Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
WGBS
15
RRBS
3
ChIP-seq
1
FAIRE-seq
Assay category
32
DNA methylation
3
DNA binding
1
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
19
July, 2019
7
November, 2018
6
August, 2017
3
November, 2017
1
October, 2019
Available data
3243
bam
3033
bigWig
1634
bed narrowPeak
1569
tsv
1358
fastq
938
bigBed narrowPeak
398
tagAlign
244
bed broadPeak
207
bigBed broadPeak
195
bed bed3+
153
zippedFastqFolder
99
txt
32
bed bedMethyl
32
bigBed bedMethyl
23
bedpe bed3+
22
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
36
Homo sapiens
Biosample type
24
tissue
8
primary cell
4
cell line
Organ
8
heart
7
epithelium
6
liver
6
pancreas
kidney
4
musculature of body
3
connective tissue
3
vasculature
2
adipose tissue
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
1
vein
Project
36
AMP
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
December, 2019
organ_slims!
kidney
BIOSAMPLE
ASSAY
36 results
search-icon
table-tab-icon
Clear Filters
WGBS
RRBS
ChIP-seq
FAIRE-seq
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
endothelial cell of umbilical vein
1
hepatocyte
1
+ See 3 more…
cell line
HepG2
1
3
See all biosamples
Download