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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
single cell RNA-seq
3
total RNA-seq
1
RRBS
1
pCHi-C
Assay category
9
Transcription
1
DNA methylation
Date released
6
August, 2021
3
February, 2020
1
July, 2019
1
March, 2020
Available data
185
bam
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
11
Homo sapiens
Biosample type
10
tissue
1
primary cell
Organ
100
heart
16
brain
16
kidney
15
epithelium
14
liver
11
pancreas
11
vasculature
10
blood vessel
6
eye
6
musculature of body
5
connective tissue
4
artery
3
adipose tissue
3
limb
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
11
AMP
Genome assembly (visualization)
1
hg19
Lab
11
AMP-T2D consortium
files.file_type!
bigWig
BIOSAMPLE
ASSAY
11 results
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single cell RNA-seq
total RNA-seq
RRBS
pCHi-C
tissue
aorta
4
1
pulmonary artery
2
ascending aorta
1
coronary artery
1
tibial artery
1
primary cell
choroid plexus epithelial cell
1
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