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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
total RNA-seq
3
RRBS
2
small RNA-seq
1
WGBS
1
pCHi-C
Assay category
6
Transcription
4
DNA methylation
Date released
6
July, 2019
3
March, 2020
2
August, 2017
February, 2020
Available data
68
bigWig
60
bed narrowPeak
57
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
7
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
11
Homo sapiens
Biosample type
8
tissue
3
primary cell
Organ
477
connective tissue
401
adipose tissue
269
pancreas
176
liver
173
heart
129
epithelium
67
vasculature
66
blood vessel
58
bone element
56
artery
28
kidney
16
brain
14
embryo
11
musculature of body
5
eye
5
limb
4
nerve
3
spleen
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
stomach
1
thymus
1
urinary bladder
Project
11
AMP
Genome assembly (visualization)
9
hg19
7
GRCh38
Lab
11
AMP-T2D consortium
month_released!
February, 2020
July, 2018
BIOSAMPLE
ASSAY
11 results
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total RNA-seq
RRBS
small RNA-seq
WGBS
pCHi-C
tissue
skeletal muscle tissue
1
2
1
psoas muscle
2
1
muscle of leg
1
primary cell
skeletal muscle satellite cell
1
1
skeletal muscle cell
1
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