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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 17WGBS
  • 15RRBS
Assay category
  • 32DNA methylation
Date released
  • 23July, 2019
  • 7November, 2018
  • 2August, 2017
Available data
  • 3255bam
  • 3056bigWig
  • 1723bed narrowPeak
  • 1591tsv
  • 1216fastq
  • 978bigBed narrowPeak
  • 382tagAlign
  • 270bed bed3+
  • 269bed broadPeak
  • 232bigBed broadPeak
  • 161txt
  • 153zippedFastqFolder
  • 64xls
  • 32bed bedMethyl
  • 32bigBed bedMethyl
  • 23bedpe bed3+
  • 23hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 32Homo sapiens
Biosample type
  • 22tissue
  • 9primary cell
  • 1cell line
Organ
  • 8heart
  • 6epithelium
  • 6pancreas
  • 4kidney
  • 3connective tissue
  • 2adipose tissue
  • 2brain
  • 2liver
  • 2musculature of body
  • 2spleen
  • 2vasculature
  • 1blood vessel
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 32AMP
Genome assembly (visualization)
  • 17GRCh38
  • 15hg19
Lab
  • 32AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.platform.term_name!
  • Illumina Genome Analyzer IIx
BIOSAMPLE
ASSAY

32 results

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Clear Filters
WGBS
RRBS
tissue
heart left ventricle21
pancreas21
adipose tissue2
body of pancreas2
heart right ventricle2
primary cell
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
cell line
HepG21
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