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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 19RRBS
  • 14WGBS
Assay category
  • 33DNA methylation
Date released
  • 23July, 2019
  • 6November, 2018
  • 4August, 2017
Available data
  • 3183bam
  • 3010bigWig
  • 1691bed narrowPeak
  • 1553tsv
  • 1125fastq
  • 940bigBed narrowPeak
  • 398tagAlign
  • 322bed broadPeak
  • 285bigBed broadPeak
  • 271bed bed3+
  • 155txt
  • 151zippedFastqFolder
  • 64xls
  • 33bed bedMethyl
  • 33bigBed bedMethyl
  • 23bedpe bed3+
  • 23hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 33Homo sapiens
Biosample type
  • 22tissue
  • 10primary cell
  • 1cell line
Organ
  • 8heart
  • 6epithelium
  • 5pancreas
  • 4kidney
  • 4musculature of body
  • 3liver
  • 2brain
  • 2spleen
  • 2vasculature
  • 1blood vessel
  • 1connective tissue
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 33AMP
Genome assembly (visualization)
  • 19hg19
  • 14GRCh38
Lab
  • 33AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.read_length!
  • 100
BIOSAMPLE
ASSAY

33 results

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Clear Filters
RRBS
WGBS
tissue
heart left ventricle12
body of pancreas2
heart right ventricle2
pancreas11
skeletal muscle tissue2
primary cell
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
cell line
HepG21
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