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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 19RRBS
  • 16WGBS
Assay category
  • 35DNA methylation
Date released
  • 23July, 2019
  • 6August, 2017
  • 6November, 2018
Available data
  • 3257bam
  • 3034bigWig
  • 1809bed narrowPeak
  • 1477tsv
  • 1147fastq
  • 1034bigBed narrowPeak
  • 398tagAlign
  • 321bed broadPeak
  • 284bigBed broadPeak
  • 273bed bed3+
  • 161txt
  • 112zippedFastqFolder
  • 64xls
  • 35bed bedMethyl
  • 35bigBed bedMethyl
  • 23bedpe bed3+
  • 23hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 35Homo sapiens
Biosample type
  • 24tissue
  • 10primary cell
  • 1cell line
Organ
  • 8heart
  • 6epithelium
  • 5pancreas
  • 4kidney
  • 4musculature of body
  • 3connective tissue
  • 3liver
  • 2adipose tissue
  • 2brain
  • 2spleen
  • 2vasculature
  • 1blood vessel
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 35AMP
Genome assembly (visualization)
  • 19hg19
  • 16GRCh38
Lab
  • 35AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.read_length!
  • 101
BIOSAMPLE
ASSAY

35 results

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Clear Filters
RRBS
WGBS
tissue
heart left ventricle12
adipose tissue2
body of pancreas2
heart right ventricle2
pancreas11
primary cell
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
cell line
HepG21
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