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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
10
WGBS
Assay category
28
DNA methylation
Date released
22
July, 2019
November, 2018
6
August, 2017
Available data
3225
bam
3010
bigWig
1638
bed narrowPeak
1594
tsv
1204
fastq
897
bigBed narrowPeak
398
tagAlign
309
bed broadPeak
272
bigBed broadPeak
260
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
7
csv
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
28
Homo sapiens
Biosample type
19
tissue
9
primary cell
Organ
8
heart
6
epithelium
4
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
2
pancreas
2
vasculature
1
blood vessel
eye
1
limb
1
pericardium
Project
28
AMP
Genome assembly (visualization)
18
hg19
10
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
November, 2018
organ_slims!
eye
large intestine
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
28 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
adipose tissue
2
heart right ventricle
2
skeletal muscle tissue
2
aorta
1
+ See 9 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
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