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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
WGBS
14
RRBS
Assay category
29
DNA methylation
Date released
18
July, 2019
7
November, 2018
4
August, 2017
Available data
2805
bam
2612
bigWig
1621
bed narrowPeak
1314
fastq
1174
tsv
928
bigBed narrowPeak
390
tagAlign
241
bed broadPeak
205
bigBed broadPeak
189
bed bed3+
153
zippedFastqFolder
99
txt
29
bed bedMethyl
29
bigBed bedMethyl
22
bedpe bed3+
22
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
3
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
29
Homo sapiens
Biosample type
21
tissue
7
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
kidney
4
musculature of body
3
connective tissue
3
liver
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
pericardium
Project
29
AMP
Genome assembly (visualization)
15
GRCh38
14
hg19
Lab
29
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
adipose tissue
kidney
pericardium
BIOSAMPLE
ASSAY
29 results
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Clear Filters
WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
body of pancreas
2
heart right ventricle
2
skeletal muscle tissue
2
+ See 8 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
retinal pigment epithelial cell
1
+ See 2 more…
cell line
HepG2
1
See all biosamples
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