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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 19RRBS
  • 15WGBS
Assay category
  • 34DNA methylation
Date released
  • 23July, 2019
  • 7November, 2018
  • 4August, 2017
Available data
  • 2950bam
  • 2744bigWig
  • 1804bed narrowPeak
  • 1314fastq
  • 1199tsv
  • 1032bigBed narrowPeak
  • 390tagAlign
  • 319bed broadPeak
  • 283bigBed broadPeak
  • 267bed bed3+
  • 161txt
  • 153zippedFastqFolder
  • 64xls
  • 34bed bedMethyl
  • 34bigBed bedMethyl
  • 23hic
  • 22bedpe bed3+
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 34Homo sapiens
Biosample type
  • 23tissue
  • 10primary cell
  • 1cell line
Organ
  • 8heart
  • 6epithelium
  • 6pancreas
  • 4kidney
  • 4musculature of body
  • 3connective tissue
  • 3liver
  • adipose tissue
  • 2brain
  • 2spleen
  • 2vasculature
  • 1blood vessel
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 34AMP
Genome assembly (visualization)
  • 19hg19
  • 15GRCh38
Lab
  • 34AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
organ_slims!
  • adipose tissue
BIOSAMPLE
ASSAY

34 results

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Clear Filters
RRBS
WGBS
tissue
heart left ventricle12
pancreas12
body of pancreas2
heart right ventricle2
skeletal muscle tissue2
primary cell
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
cell line
HepG21
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