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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
17
WGBS
Assay category
35
DNA methylation
Date released
22
July, 2019
7
November, 2018
6
August, 2017
Available data
3283
bam
3077
bigWig
1703
bed narrowPeak
1589
tsv
1298
fastq
956
bigBed narrowPeak
398
tagAlign
316
bed broadPeak
279
bigBed broadPeak
267
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
35
Homo sapiens
Biosample type
25
tissue
9
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
eye
1
limb
1
pericardium
Project
35
AMP
Genome assembly (visualization)
18
hg19
17
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
blood
eye
nerve
spinal cord
BIOSAMPLE
ASSAY
35 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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