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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 17RRBS
  • 17WGBS
Assay category
  • 34DNA methylation
Date released
  • 21July, 2019
  • 7November, 2018
  • 6August, 2017
Available data
  • 3149bam
  • 2947bigWig
  • 1614bed narrowPeak
  • 1574tsv
  • 1337fastq
  • 915bigBed narrowPeak
  • 280tagAlign
  • 275bed broadPeak
  • 247bigBed broadPeak
  • 238bed bed3+
  • 161txt
  • 153zippedFastqFolder
  • 64xls
  • 34bed bedMethyl
  • 34bigBed bedMethyl
  • 23bedpe bed3+
  • 23hic
  • 11bed bed3
  • 8csv
  • 7bed bedgraph
  • 4tar
  • 3cool
  • 2hdf5
  • 2ibed
  • 1bedpe
  • 1vcf
Organism
  • 34Homo sapiens
Biosample type
  • 24tissue
  • 9primary cell
  • 1cell line
Organ
  • 8heart
  • 6epithelium
  • 6pancreas
  • 4kidney
  • 4musculature of body
  • 3connective tissue
  • 3liver
  • 2adipose tissue
  • brain
  • 2spleen
  • 2vasculature
  • 1blood vessel
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 34AMP
Genome assembly (visualization)
  • 17GRCh38
  • 17hg19
Lab
  • 34AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
organ_slims!
  • brain
BIOSAMPLE
ASSAY

34 results

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Clear Filters
RRBS
WGBS
tissue
heart left ventricle12
pancreas12
adipose tissue2
body of pancreas2
heart right ventricle2
primary cell
cardiac fibroblast1
cardiac muscle cell1
epithelial cell of proximal tubule1
hepatocyte1
kidney epithelial cell1
cell line
HepG21
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