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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 18RRBS
  • 15WGBS
Assay category
  • 33DNA methylation
Date released
  • 22July, 2019
  • 7November, 2018
  • 4August, 2017
Available data
  • 2799bam
  • 2599bigWig
  • 1742bed narrowPeak
  • 1257fastq
  • 1122tsv
  • 1014bigBed narrowPeak
  • 376tagAlign
  • 312bed broadPeak
  • 276bigBed broadPeak
  • 246bed bed3+
  • 161txt
  • 153zippedFastqFolder
  • 64xls
  • 33bed bedMethyl
  • 33bigBed bedMethyl
  • 23hic
  • 22bedpe bed3+
  • 8csv
  • 6bed bed3
  • 4hdf5
  • 4tar
  • 3bed bedgraph
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 33Homo sapiens
Biosample type
  • 23tissue
  • 9primary cell
  • 1cell line
Organ
  • 8heart
  • 6epithelium
  • 6pancreas
  • 4kidney
  • 4musculature of body
  • connective tissue
  • 3liver
  • 2adipose tissue
  • 2brain
  • 2spleen
  • 2vasculature
  • 1blood vessel
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 33AMP
Genome assembly (visualization)
  • 18hg19
  • 15GRCh38
Lab
  • 33AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
organ_slims!
  • connective tissue
BIOSAMPLE
ASSAY

33 results

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Clear Filters
RRBS
WGBS
tissue
heart left ventricle12
pancreas12
body of pancreas2
heart right ventricle2
skeletal muscle tissue2
primary cell
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
kidney epithelial cell1
cell line
HepG21
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